PDB_ID | NDB_ID | Title | Authors | Year | Resolution |
---|---|---|---|---|---|
2KAZ | 2KAZ | Folding topology of a bimolecular DNA quadruplex containing a stable mini-hairpin motif within the diagonal loop | Balkwill, G.D., Garner, T.P., Williams, H.E., Searle, M.S. | 2008 | |
2KBD | 2KBD | Solution structure of a non-palindromic 16 base-pair DNA related to the HIV-1 kappa B site: evidence for BI-BII equilibrium inducing a global dynamic curvature of the duplex. | Tisne, C., Hantz, E., Hartmann, B., Delepierre, M. | 1998 | |
2KDZ | 2KDZ | Structure of the R2R3 DNA binding domain of MYB1 protein from protozoan parasite trichomonas vaginalis in complex with MRE-1/MRE-2R DNA | Lou, Y.C., Wei, S.Y., Rajasekaran, M., Chou, C.C., Hsu, H.M., Tai, J.H., Chen, C. | 2009 | |
2KEI | 2KEI | Refined Solution Structure of a Dimer of LAC repressor DNA-Binding domain complexed to its natural operator O1 | Romanuka, J., Folkers, G.E., Biris, N., Tishchenko, E., Wienk, H., Bonvin, A.M., Kaptein, R., Boelens, R. | 2009 | |
2KEJ | 2KEJ | Solution structure of a dimer of LAC repressor DNA-binding domain complexed to its natural operator O2 | Romanuka, J., Folkers, G.E., Biris, N., Tishchenko, E., Wienk, H., Bonvin, A.M., Kaptein, R., Boelens, R. | 2009 | |
2KEK | 2KEK | Solution structure of a dimer of LAC repressor DNA-binding domain complexed to its natural operator O3 | Romanuka, J., Folkers, G.E., Biris, N., Tishchenko, E., Wienk, H., Bonvin, A.M., Kaptein, R., Boelens, R. | 2009 | |
2KH5 | 2KH5 | Binding of the human nucleotide excision repair proteins XPA and XPC/HR23B to the 5R-thymine glycol lesion and structure of the cis-(5R,6S) thymine glycol epimer in the 5'-GTgG-3' sequence: destabilization of two base pairs at the lesion site | Brown, K.L., Roginskaya, M., Zou, Y., Altamirano, A., Basu, A.K., Stone, M.P. | 2010 | |
2KH6 | 2KH6 | Binding of the human nucleotide excision repair proteins XPA and XPC/HR23B to the 5R-thymine glycol lesion and structure of the cis-(5R,6S) thymine glycol epimer in the 5'-GTgG-3' sequence: destabilization of two base pairs at the lesion site | Brown, K.L., Roginskaya, M., Zou, Y., Altamirano, A., Basu, A.K., Stone, M.P. | 2010 | |
2KH7 | 2KH7 | The cis-(5R,6S)-thymine glycol lesion occupies the wobble position when mismatched with deoxyguanosine in DNA | Brown, K.L., Basu, A.K., Stone, M.P. | 2009 | |
2KH8 | 2KH8 | The cis-(5R,6S)-thymine glycol lesion occupies the wobble position when mismatched with deoxyguanosine in DNA | Brown, K.L., Basu, A.K., Stone, M.P. | 2009 | |
2KKF | 2KKF | Solution structure of MLL CXXC domain in complex with palindromic CPG DNA | Cierpicki, T., Risner, L.E., Grembecka, J., Lukasik, S.M., Popovic, R., Omonkowska, M., Shultis, D.D., Zeleznik-Le, N.J., Bushweller, J.H. | 2009 | |
2KMK | 2KMK | Gfi-1 Zinc Fingers 3-5 complexed with DNA | Lee, S., Doddapaneni, K., Hogue, A., McGhee, L., Meyers, S., Wu, Z. | 2010 | |
2KNK | 2KNK | Differential base stacking interactions induced by trimethylene interstrand DNA cross-links in the 5'-CpG-3' and 5'-GpC-3' sequence contexts. | Huang, H., Dooley, P.A., Harris, C.M., Harris, T.M., Stone, M.P. | 2009 | |
2KNL | 2KNL | Differential base stacking interactions induced by trimethylene interstrand DNA cross-links in the 5'-CpG-3' and 5'-GpC-3' sequence contexts. | Huang, H., Dooley, P.A., Harris, C.M., Harris, T.M., Stone, M.P. | 2009 | |
2KO0 | 2KO0 | Solution structure of the THAP zinc finger of THAP1 in complex with its DNA target | Campagne, S., Saurel, O., Gervais, V., Milon, A. | 2010 | |
2KTT | 2KTT | Solution structure of a covalently bound pyrrolo[2,1-c][1,4]benzodiazepine-benzimidazole hybrid to a 10mer DNA duplex. | Rettig, M., Weingarth, M., Langel, W., Kamal, A., Kumar, P.P., Weisz, K. | 2010 | |
2KUZ | 2KUZ | 2-aminopurine incorporation perturbs the dynamics and structure of DNA. | Dallmann, A., Dehmel, L., Peters, T., Mugge, C., Griesinger, C., Tuma, J., Ernsting, N.P. | 2010 | |
2KV0 | 2KV0 | 2-Aminopurine incorporation perturbs the dynamics and structure of DNA. | Dallmann, A., Dehmel, L., Peters, T., Mugge, C., Griesinger, C., Tuma, J., Ernsting, N.P. | 2011 | |
2KV6 | 2KV6 | Tetrapeptide KWKK conjugated to oligonucleotide duplex by a trimethylene tether | Huang, H., Kozekov, I.D., Kozekova, A., Rizzo, C.J., McCullough, A.K., Lloyd, R.S., Stone, M.P. | 2010 | |
2KY7 | 2KY7 | NMR structural studies on the covalent DNA binding of a pyrrolobenzodiazepine-naphthalimide conjugate | Rettig, M., Langel, W., Kamal, A., Weisz, K. | 2010 |
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